Design and Optimization of Real-Time PCR Assays

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Abstract

SHS investigation development is considered from the geographical and historical viewpoint. 3 stages are described. Within Stage 1 the work was carried out in the Department of the Institute of Chemical Physics in Chernogolovka where the scientific discovery had been made. At Stage 2 the interest to SHS arose in different cities and towns of the former USSR. Within Stage 3 SHS entered the international scene. Now SHS processes and products are being studied in more than 50 countries.

Abstract

With increased use of real-time polymerase chain reaction technology in molecular diagnostics, consistent procedures for design, optimization and validation of molecular diagnostic methods are needed. This chapter describes a practical guiding principle that can be used in different steps of the design and validation of in-house developed real-time PCR assays. The use of the described guidelines leads to more efficient and standardized optimization and validation. Ultimately, this results in a reliable and robust molecular diagnostic assay. A statistical follow-up of the performance of the assay is included and can be achieved by determination of target values and reproducibility of internal quality controls. Since this guiding principle is independent of environment, equipment and specific applications, it can be used in any laboratory.

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