Search Result "langevin dynamics simulation"


A Monte Carlo Assisted Simulation of Stochastic Molecular Dynamics for Folding of the Protein Crambin in a Viscous Environment

Ebook: Applied Biomathematics for Nucleic Acid Chemistry and Protein Folding: Quantitative Simulations
Volume: 1 Year: 2023
Author(s):
Doi: 10.2174/9789815179965123010006

Research Article

Ld/Mm+ Simulation of Some Aristolochic and Humic Acids Species Coupledin Periodic Box with Water

Journal: Current Computer-Aided Drug Design
Volume: 17 Issue: 6 Year: 2021 Page: 708-724
Author(s): Mihai Viorel Putz,Feng Chen Ifrim

Functional Dynamics of Proteins Elucidated by Statistical Analysis of Simulation Data

Journal: Current Physical Chemistry
Volume: 2 Issue: 4 Year: 2012 Page: 443-451
Author(s): Burak Alakent,Zeynep Kurkcuoglu,Pemra Doruker

Deciphering the Flexibility and Dynamics of Geobacillus zalihae Strain T1 Lipase at High Temperatures by Molecular Dynamics Simulation (Supplementary Material)

Journal: Protein & Peptide Letters
Volume: 16 Issue: 1 Year: 2009 Page: 1360-1370
Author(s): Mohd Basyaruddin Abdul Rahman, Roghayeh Abedi Karjiban, Abu Bakar Salleh, Donald Jacobs, Mahiran Basri, Adam Leow Thean Chor, Habibah Abdul Wahab, Raja Noor Zaliha Raja Abd Rahman

Molecular Simulation in Drug Design: An Overview of Molecular Dynamics Methods

Ebook: Applied Computer-Aided Drug Design: Models and Methods
Volume: 1 Year: 2023
Author(s):
Doi: 10.2174/9789815179934123010009

Protonation States in Molecular Dynamics Simulations of Peptide Folding and Binding

Journal: Current Pharmaceutical Design
Volume: 19 Issue: 2 Year: 2013 Page: 4173-4181
Author(s): Avraham Ben- Shimon, Deborah E. Shalev, Masha Y. Niv

Deliberations and Considerations of Mesodyn Simulations in Pharmaceuticals

Ebook: Software and Programming Tools in Pharmaceutical Research
Volume: 1 Year: 2024
Author(s):
Doi: 10.2174/9789815223019124010012

Ecology of Protein Dynamics

Journal: Current Physical Chemistry
Volume: 3 Issue: 1 Year: 2013 Page: 9-16
Author(s): Giuseppe Zaccai

Molecular Dynamics Simulations of Metalloproteinases Types 2 and 3 Reveal Differences in the Dynamic Behavior of the S1 Binding Pocket

Journal: Current Pharmaceutical Design
Volume: 13 Issue: 3 Year: 2007 Page: 3471-3475
Author(s): Cesar Augusto F. de Oliveira, Maurice Zissen, John Mongon, J. Andrew Mccammon

Recent Applications of Replica-Exchange Molecular Dynamics Simulations of Biomolecules

Journal: Current Physical Chemistry
Volume: 2 Issue: 4 Year: 2012 Page: 401-412
Author(s): Yuji Sugita,Naoyuki Miyashita,Pai-Chi Li,Takao Yoda,Yuko Okamoto

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