In Silico Investigation of Luminol, Its Analogues and Mechanism of Chemiluminescence for Blood Identification Beyond Forensics

Page: [117 - 127] Pages: 11

  • * (Excluding Mailing and Handling)

Abstract

Objective: This study aimed at discovering chemiluminescent analogues of luminol, predict their molecular binding to hemoglobin of bloodstains in household crime, and expound the mechanism of chemiluminescence of luminol.

Materials and Methods: Similarity and clustering analyses of luminol analogues were conducted, and molecular docking was carried out using hemoglobin from Homo sapiens and four domestic organisms namely Gallus gallus, Drosophila melanogaster, Rattus norvegicus, and Canis familiaris.

Results: The results showed the order of overall binding score as D. melanogaster > H. sapiens > C. familiaris > R. norvegicus > G. gallus. Seven compounds namely ZINC16958228, ZINC17023010, ZINC19915427, ZINC34928954, ZINC19915369, ZINC19915444, and ZINC82294978, were found to be consistently stable in binding with diverse hemoglobin and possibly have chemiluminescence than luminol in this in silico study. The interaction of human hemoglobin with luminol and its analogues, showed that amino acid residues His45, Lys61, Asn68, Val73, Met76, Pro77, Ala79, Ala82, Leu83, Pro95, Phe98, Lys99, Ser102, Ser133, Ala134, and Thr134, were possibly significant in the mechanism of action of presumptive test compounds. It was hypothesized that the improved mechanism of chemiluminescent for the identification of blood was based on peroxidase-like reaction, that produces nitric oxide which binds to hemoglobin (Hb) and inhibits Hb degradation without yielding fluorescent products. The compound 2,3-benzodioxine-1,4,5(6H)-trione was formed, which possibly emits light.

Conclusion: This study provides novel insight on the luminol and its expanded mechanism for broader possible applications with careful development of new methodologies.

Keywords: Luminol, chemical analogues, molecular docking, hemoglobin, chemiluminescence, mechanism design.

Graphical Abstract

[1]
Fatoki TH. Forensic DNA Profiling: Strengths and Limitations (Presentation). Researchgate 2016.
[2]
Gefrides L, Welch K. Forensic Biology: Serology and DNAThe Forensic Laboratory Handbook Procedures and Practice. Springer Science Business Media, LLC 2011; pp. 1-37.
[http://dx.doi.org/10.1007/978-1-60761-872-0_2]
[3]
Dodeigne C, Thunus L, Lejeune R. Chemiluminescence as diagnostic tool. A review. Talanta 2000; 51(3): 415-39.
[http://dx.doi.org/10.1016/S0039-9140(99)00294-5] [PMID: 18967873]
[4]
Khan P, Idrees D, Moxley MA, et al. Luminol-based chemiluminescent signals: clinical and non-clinical application and future uses. Appl Biochem Biotechnol 2014; 173(2): 333-55.
[http://dx.doi.org/10.1007/s12010-014-0850-1] [PMID: 24752935]
[5]
Quickenden TI, Ennis CP, Creamer JI. The forensic use of luminol chemiluminescence to detect traces of blood inside motor vehicles. Luminescence 2004; 19(5): 271-7.
[http://dx.doi.org/10.1002/bio.780] [PMID: 15449350]
[6]
Arruda-Vasconcelos R, Chantre LGF, Lopes RSC, Lopes CC, Barbosa-Ribeiro M, Gomes BPFA. Application of forensic luminol for blood detection in endodontic files. Rev Odontol UNESP 2017; 46(4): 227-31.
[http://dx.doi.org/10.1590/1807-2577.24916]
[7]
Gaensslen RE. Matthew Bender and Co. (Division of Lexis), New York 2000; 1.Forensic Analysis of Biological Evidence.Wecht CH (editor), Forensic Sciences. .
[8]
Gross AM, Harris KA, Kaldun GL. The effect of luminol on presumptive tests and DNA analysis using the polymerase chain reaction. J Forensic Sci 1999; 44(4): 837-40.
[http://dx.doi.org/10.1520/JFS14561J] [PMID: 10432617]
[9]
Lee HC, Gaenslen RE, Pagliaro EM, Buman MB, Berka KM, Keith TP, et al. The effect of presumptive test, laten fingerprint and some other reagents and materials on subsequent serological identification, genetic marker and DNA testing in bloodstains. J Forensic Ident 1989; 39: 331-50.
[10]
Hochmeister MN, Budowle B, Baechtel FS. Effects of presumptive test reagents on the ability to obtain restriction fragment length polymorphism (RFLP) patterns from human blood and semen stains. J Forensic Sci 1991; 36(3): 656-61.
[http://dx.doi.org/10.1520/JFS13074J] [PMID: 1677394]
[11]
Liu YY, Harbison S. A review of bioinformatic methods for forensic DNA analyses. Forensic Sci Int Genet 2018; 33: 117-28.
[http://dx.doi.org/10.1016/j.fsigen.2017.12.005] [PMID: 29247928]
[12]
Baggerly KA, Coombes KR. Deriving chemosensitivity from cell lines: forensic bioinformatics and reproducible research in high-throughput biology. Ann Appl Stat 2009; 3(4): 1309-34.
[http://dx.doi.org/10.1214/09-AOAS291]
[13]
Zoete V, Daina A, Bovigny C, Michielin O. SwissSimilarity: A Web Tool for Low to Ultra High Throughput Ligand-Based Virtual Screening. J Chem Inf Model 2016; 56(8): 1399-404.
[http://dx.doi.org/10.1021/acs.jcim.6b00174] [PMID: 27391578]
[14]
Tyler WH, Cao BY, Girke T. ChemMine tools: an online service for analyzing and clustering small molecules. Nucleic Acids Res 2011; 39W486-91
[15]
Fatoki TH, Awofisayo OA, Ogunyewo OA, Ugboko HU, Sanni DM. Impacts of Analogy and Dimerization of Bioactive Compounds on Molecular Biological Functions. J Adv Med Pharm Sci 2018; 19(1): 1-14.
[http://dx.doi.org/10.9734/JAMPS/2018/45211]
[16]
Morris GM, Huey R, Lindstrom W, et al. AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility. J Comput Chem 2009; 30(16): 2785-91.
[http://dx.doi.org/10.1002/jcc.21256] [PMID: 19399780]
[17]
Trott O, Olson AJ. AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading. J Comput Chem 2010; 31(2): 455-61.
[PMID: 19499576]
[18]
da Silva RR, Agustini BC, da Silva ALL, Frigeri HR. Luminol in the forensic science. J Biotechnol Biodivers 2012; 3(4): 172-7.
[http://dx.doi.org/10.20873/jbb.uft.cemaf.v3n4.rogiskisilva]
[19]
Albertin R, Arribas MAG, Bastos EL, et al. Quimiluminescência orgânica: alguns experimentos de demonstração para a sala de aula. Quim Nova 1998; 21(6): 772-9.
[http://dx.doi.org/10.1590/S0100-40421998000600018]
[20]
Furniss BS, Hannaford AJ, Smith PWG, Tatchell AR. Vogel’s Textbook of Practical Organic Chemistry. 5th ed. Longman Group UK Limited 1989; pp. 1-1540.
[21]
Sanni DM, Fatoki TH, Kolawole AO, Akinmoladun AC. Xeronine structure and function: computational comparative mastery of its mystery. In Silico Pharmacol 2017; 5(8): 8.
[http://dx.doi.org/10.1007/s40203-017-0028-y] [PMID: 28955650]
[22]
Saraiva MA, da Rosa Ávila E, da Silva GF, et al. Exposure of Drosophila melanogaster to Mancozeb Induces Oxidative Damage and Modulates Nrf2 and HSP70/83. Oxid Med Cell Longev 2018.20185456928
[http://dx.doi.org/10.1155/2018/5456928] [PMID: 30116484]
[23]
Abolaji AO, Kamdem JP, Lugokenski TH, et al. Involvement of oxidative stress in 4-vinylcyclohexene-induced toxicity in Drosophila melanogaster. Free Radic Biol Med 2014; 71: 99-108.
[http://dx.doi.org/10.1016/j.freeradbiomed.2014.03.014] [PMID: 24681254]
[24]
Bier E. Drosophila, the golden bug, emerges as a tool for human genetics. Nat Rev Genet 2005; 6(1): 9-23.
[http://dx.doi.org/10.1038/nrg1503] [PMID: 15630418]
[25]
Leitch O, Lennard C, Paul Kirkbride K, Anderson A. Drosophila melanogaster odorant receptors as volatile compound detectors in forensic science: a proof-of-concept study. Anal Bioanal Chem 2018; 410(29): 7739-47.
[http://dx.doi.org/10.1007/s00216-018-1390-2] [PMID: 30280229]
[26]
Jiang H, Edgar BA. Intestinal stem cells in the adult Drosophila midgut. Exp Cell Res 2011; 317(19): 2780-8.
[http://dx.doi.org/10.1016/j.yexcr.2011.07.020] [PMID: 21856297]
[27]
Kulstein G, Amendt J, Zehner R. Blow fly artifacts from blood and putrefaction fluid on various surfaces: A source for forensic STR typing. Entomol Exp Appl 2015; 157: 255-62.
[http://dx.doi.org/10.1111/eea.12365]
[28]
Rivers D, Geiman T. Insect Artifacts Are More than Just Altered Bloodstains. Insects 2017; 8(2): 37-52.
[http://dx.doi.org/10.3390/insects8020037] [PMID: 28350353]
[29]
Yoshida H, Ureshino K, Ishida J, Nohta H, Yamaguchi M. Chemiluminescent properties of some luminol related compounds (II). Dyes Pigments 1999; 41: 177-82.
[http://dx.doi.org/10.1016/S0143-7208(98)00067-9]
[30]
Menezes FMC. Synthesis and Chemiluminescence Studies of Luminol and Derivatives 2010.
[31]
An JH, Shin KJ, Yang WI, Lee HY. Body fluid identification in forensics. BMB Rep 2012; 45(10): 545-53.
[http://dx.doi.org/10.5483/BMBRep.2012.45.10.206] [PMID: 23101507]
[32]
Weber K. [The use of chemiluminescence of Luminol in forensic medicine and toxicology I Identification of blood stains] Dtsch Z Gesamte Gerichtl Med 1966; 57(3): 410-23.
[PMID: 5994184]
[33]
Stoica BA, Bunescu S, Neamtu A, Bulgaru-Iliescu D, Foia L, Botnariu EG. Improving Luminol Blood Detection in Forensics. J Forensic Sci 2016; 61(5): 1331-6.
[http://dx.doi.org/10.1111/1556-4029.13141] [PMID: 27329571]
[34]
Maeztu R, Tardajos G, González-Gaitano G. Natural cyclodextrins as efficient boosters of the chemiluminescence of luminol and isoluminol: exploration of potential applications. J Phys Chem B 2010; 114(8): 2798-806.
[http://dx.doi.org/10.1021/jp909707x] [PMID: 20131859]
[35]
Chen J, Wang Q, Huang L, et al. Prussian blue with intrinsic heme-like structure as peroxidase mimic. Nano Res 2018; 11: 4905-13.
[http://dx.doi.org/10.1007/s12274-018-2079-8]
[36]
Rifkind JM, Nagababu E, Ramasamy S, Ravi LB. Hemoglobin redox reactions and oxidative stress. Redox Rep 2003; 8(5): 234-7.
[http://dx.doi.org/10.1179/135100003225002817] [PMID: 14962355]
[37]
Ranghino G, Scorza E, Sjögren T, Williams PA, Ricci M, Hajdu J. Quantum mechanical interpretation of nitrite reduction by cytochrome cd1 nitrite reductase from Paracoccus pantotrophus. Biochemistry 2000; 39(36): 10958-66.
[http://dx.doi.org/10.1021/bi000178y] [PMID: 10998232]
[38]
Nagababu E, Chrest FJ, Rifkind JM. Hydrogen-peroxide-induced heme degradation in red blood cells: the protective roles of catalase and glutathione peroxidase. Biochim Biophys Acta 2003; 1620(1-3): 211-7.
[http://dx.doi.org/10.1016/S0304-4165(02)00537-8] [PMID: 12595091]
[39]
Nagababu E, Ramasamy S, Rifkind JM, Jia Y, Alayash AI. Site-specific cross-linking of human and bovine hemoglobins differentially alters oxygen binding and redox side reactions producing rhombic heme and heme degradation. Biochemistry 2002; 41(23): 7407-15.
[http://dx.doi.org/10.1021/bi0121048] [PMID: 12044174]
[40]
Nagababu E, Rifkind JM. Reaction of hydrogen peroxide with ferrylhemoglobin: superoxide production and heme degradation. Biochemistry 2000; 39(40): 12503-11.
[http://dx.doi.org/10.1021/bi992170y] [PMID: 11015232]
[41]
Nagababu E, Rifkind JM. Formation of fluorescent heme degradation products during the oxidation of hemoglobin by hydrogen peroxide. Biochem Biophys Res Commun 1998; 247(3): 592-6.
[http://dx.doi.org/10.1006/bbrc.1998.8846] [PMID: 9647738]
[42]
Eisinger J, Flores J, Tyson JA, Shohet SB. Fluorescent cytoplasm and Heinz bodies of hemoglobin Köln erythrocytes: evidence for intracellular heme catabolism. Blood 1985; 65(4): 886-93.
[http://dx.doi.org/10.1182/blood.V65.4.886.886] [PMID: 3978233]